by YT Huang · 2021 — The accuracy of Nanopore sequencing has improved year by year thanks to new basecalling algorithms (e.g., from Albacore, Guppy, to Bonito) ...
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by D Vacca · 2020 — For this, we used the GPU version of the Nanopore Guppy basecaller (v3.4.4) tool (7) with the following parameters: “flow_cell = FLO-MIN106” ...
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by W De Coster · 2019 · Cited by 79 — Sequencing DNA fragments using a protein nanopore is a relatively old ... the Oxford Nanopore base caller Guppy with the “flipflop” algorithm, ...
by Y Li · 2020 · Cited by 12 — Nanopore sequencing is one of the leading third-generation sequencing ... for the newest official basecaller, Guppy, which can support both GPU and CPU.
Nanopore base calling augmentation.
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Guppy (production nanopore basecalling software) is the recommended backend to obtain this output from raw ...I agree to genomax 200 % ; WouterDeCoster is the best person to answer! However, if you have access to nanopore community page then this ...
Guppy V1 5 1, supplied by Oxford Nanopore, used in various techniques.. Bioz Stars score: 86/100, based on 1 PubMed citations.. ZERO BIAS - scores, article ...
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Guppy is a neural network based basecaller that in addition to basecalling also performs filtering of low quality reads, clipping of Oxford Nanopore adapters and ...
14 hours ago — Let's learn step by step how to create your own guppy strain, create the ... reference human genomes using PromethION nanopore sequencing ...
A post sequencing QC tool for Oxford Nanopore sequencers.. Container ... Oxford Nanopore Technologies Guppy basecaller Software on GPU mode. Bikini love, 90860216_273968756941591_9095326 @iMGSRC.RU
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The PromethION is a benchtop device for nanopore sequencing designed to run and ... Guppy is a data processing toolkit that contains the Oxford Nanopore ...
Apr 13, 2016 — Each nanopore is just a billionth of a meter wide.. The technology in the MinION threads the genetic material through the nanopores where tiny ...
Nanopore demultiplexing, QC and alignment pipeline.. ... Guppy will be used to basecall and demultiplex the data.. Various options have been provided to ...
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This is "NL 20200603 Guppy Introduction - Updated - HJ" by Oxford Nanopore on Vimeo, the home ...
by P Gießelmann · 2019 · Cited by 36 — production-grade software (Guppy v.3.0.3) developed by Oxford. How To Install Window Sash Spring Bolts
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